Cohort 2 CIRCLE Visiting Fellow
The main focus of my CIRCLE
research has been to develop drought tolerant maize varieties adaptable to the
effects of climate change. At the onset
of my CIRCLE research fellowship, under the supervision of Dr. Richard Edema,
the coordinator of Central and East African Regional M.Sc. (Plant Breeding and
Seed Systems) program, of the Department of Agricultural Production, Makerere
University, Uganda, we engaged all necessary stakeholders. This included Maize
breeders from the Cereal Research Program of National Crop Resources Research
Institute (NaCRRI), Namulonge, Kampala, Uganda who helped with the provision and
field evaluation of drought tolerant maize parental lines. Developing improved
varieties of crops conventionally in the field takes a long time and the
improvement is not stable due to the influence of the environment. However, the
Cereal Research Program already has an existing maize breeding program under
the leadership of the Dr. Godfrey Asea, a maize breeder who is also the
Director of the Institute. Dr. Asea willingly directed the farm technicians to
provide available drought tolerant maize inbred/parental lines to be used for
phenotypic selection and molecular characterization. This meant we were able to
develop drought tolerant maize hybrids which will be released to farmers to
enhance food security in the face of climate change.
Field evaluation and
phenotypic selection
Sixty-eight maize inbred lines
were planted for evaluation in four different locations in Uganda and Kenya
under different conditions; Optimum and Low-Nitrogen conditions (NaCCRI
research field, Namulonge and Serere in Uganda), Drought stress (Kasese, Uganda
and Kiboko, Kenya).
Measuring chlorophyll content (a drought tolerant trait) with Photosynq equipment at the NaCRRI experimental field, Namulonge, Uganda |
Molecular characterization
of the drought tolerant inbred lines
In addition to evaluation in the
field, genomic DNA was extracted from the sixty-eight maize inbred lines. The
extracted DNA was then quantified with a NanoDrop Spectrophotometer to ensure
that it was pure. Nineteen Simple Sequence Repeats (SSRs) molecular markers
already linked to the gene controlling drought tolerance in previous studies
were used for the Polymerase Chain Reaction (PCR). An ARKTIK 96 well thermal
cycler was used for the PCR amplification of the DNA after which the PCR
reaction mixtures undergo GEL Electrophoresis to determine the location of the
genes controlling drought on the chromosomes of the maize. This laboratory work has led to the selection
of drought tolerant parental lines which could have taken several seasons of
field evaluations before this selection could take place.
Extracting, quantifying and amplifying genomic DNA at the Biotechnology Laboratory |
Research Outputs
The identified maize
inbred/parental lines will be used to develop drought tolerant maize hybrids in
November/December for the agro-ecologies of Uganda. These will later be
released to farmers in these areas for better grain yield under drought
conditions. The research findings of the phenotypic field evaluations and
molecular works have been written up for presentation at the forthcoming 11th
International conference of the African Association of Remote Sensing of the
Environment (AARSE) and National Agriculture Research Organization-Makerere
(NARO-MAK) Joint Agricultural Dissemination Conferences in October and November
respectively.
My experience in the biotechnology
laboratory has been a worthwhile and enriching one and I have acquired new
molecular laboratory skills. These skills will lead to further training on
“Molecular laboratory techniques” at the University of Cambridge, UK. My
appreciation goes to my Supervisor on this program and the CIRCLE management
team for supporting my attendance at the training. Indeed my molecular
laboratory skills and capacity on Climate Change impacts research has improved
tremendously through this program, kudos to the CIRCLE fellowship!!!